Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015892102.1_cds_XP_016447004.1_41808
CDS Infomation

[gene=LOC107772035] [db_xref=GeneID:107772035] [protein=asparagine--tRNA ligase, cytoplasmic 1-like] [protein_id=XP_016447004.1] [location=complement(join(24668..24851,25051..25109,25795..25924,26007..26260,26677..27318,28111..28590))] [gbkey=CDS]
Sequence

ATGTCATTTGATTCAACGCCGCCGGCGGTGGAGAAGCTCACCCTAAACGCCGCCACCGTA
GATGAAGCCAAATTCTCCCAACGCGTCCCGATCCGTTCTATCGTCGGCCGTCCCGACGGC
GGAGCTGGACTCGCCGGAAATGTCGTCAAAATCGGCGGCTGGGTAAAAACAGGTCGAGAA
CAAGGCAAAGGTTCATTCGCGTTCCTCGAAGTGAACGACGGCTCTTGCCCGGCGAATCTC
CAAGTAATCGTCGATGCTTCAGTTCACAAGCTCGGTGATTTGGTACTTACTGGTACTTGC
GTACACGTGGAAGGTGAATTGAAGGTACCTCCTGAAGGCGCAAAGCAAAAAGTTGAACTT
CGTGTACAGAAGGTTCTATCTGTTGGTACTGTTGATGCTGCCAAGTATCCGTTGCCGAAA
ACTAAGTTAACACTTGAGTTTTTAAGGGATTTTGTTCATCTTCGGCCCCGAACTAACACG
ATTTCTGCCATTGCAAGAATCCGTAATGCCTTAGCTTATGCCACCCATACATTCTTCCAG
AAGAATGGGTTTCTTTATATCCACACTCCAATCGTCACAACAAGTGATTGTGAGGGTGCT
GGTGAGATGTTCCAAGTTACTACTTTGATAAACGAAGCTGAAAAATTGGAGAAGGAGCTG
AAAGAGAATCCTGCTCCTTCAGAATCTGACATTAAAGCTGCTGAGCAACTTGTCAAAGAG
AAAGGGGAGGCAGTTGCTCAGTTAAAAGCTAATAAGGCGAGCATTGAGAAAAGTGGTGCC
AGTATTGCGGACATCAACAAGCAAATCAGTGCTGCAGTTGCTGAGCTGCAAAGAGCTAAA
GAGAATCTACTGAAGTTGCAAGAGAGATTTAAACTGGGAGAAAGGTGTAGACTCTCTGCT
GGTATCCCCAAAAAGGACGGAAAGGTTGATTACTCTGAGGATTTCTTTGCACGGCAAGCT
TTCTTGACTGTGTCTGGCCAACTCCAAGTTGAAACCTATGCCTGTGCACTTTCTAGTGTG
TATACTTTTGGACCAACTTTTCGAGCCGAACAGTCCCACACTTCTCGGCATCTTGCGGAG
TTCTGGATGGTGGAGCCTGAAATAGCTTTTGCAGATATCCAGGATGATATGAATTGTGCT
GAGGCATATGTGAAGTTTCTGTGTCAGTGGTTACTTGACCATTGCCTTGATGACATGGAA
TTTATAACTAAATTTATAGATAAAGATGCTTTGAGTAGACTTAGAATGGTTGCCTCATCG
AACTGTTATCGAATAACTTATACAGAAGCCATAGCCATTCTCGAGGTAGCAGCCAAAGTG
AAGAAATTTGAAAATAAAGTAGAATGGGGTATTGACTTAGCATCTGAACATGAAAGATAT
TTGACCGAAGAGCATTTTAAGGCACCTGTTATTGTGTTCAACTACCCAAAAGGGATTAAA
GCATTTTACATGAAGGTGAATGAAGACAAGAAGACAGTTGCTGCCATGGATCTGCTTGTA
CCAAAGGTGGGAGAACTAATTGGAGGAAGCCAAAGAGAAGAGGATTATGAAGTCCTCAGA
ACAAGGATACTGGAGATGGGTTTACCACTAGAGCCATATGAGTGGTATCTAGACCTGAGG
CGCTATGGTTCTGTGAAGCACAGTGGTTTCGGTTTAGGCTTTGAGCGAATGATTCTTTTC
GCCACTGGGATAGAAAACATTCGGGATGTCATTCCCTTTCCCAGATATCCAGGAAGAGCC
GATCTCTAA

Peptide Sequence

PEP ID

XP_016447004.1
PEP Infomation

PREDICTED: asparagine--tRNA ligase, cytoplasmic 1-like [Nicotiana tabacum]
Sequence

MSFDSTPPAVEKLTLNAATVDEAKFSQRVPIRSIVGRPDGGAGLAGNVVKIGGWVKTGRE
QGKGSFAFLEVNDGSCPANLQVIVDASVHKLGDLVLTGTCVHVEGELKVPPEGAKQKVEL
RVQKVLSVGTVDAAKYPLPKTKLTLEFLRDFVHLRPRTNTISAIARIRNALAYATHTFFQ
KNGFLYIHTPIVTTSDCEGAGEMFQVTTLINEAEKLEKELKENPAPSESDIKAAEQLVKE
KGEAVAQLKANKASIEKSGASIADINKQISAAVAELQRAKENLLKLQERFKLGERCRLSA
GIPKKDGKVDYSEDFFARQAFLTVSGQLQVETYACALSSVYTFGPTFRAEQSHTSRHLAE
FWMVEPEIAFADIQDDMNCAEAYVKFLCQWLLDHCLDDMEFITKFIDKDALSRLRMVASS
NCYRITYTEAIAILEVAAKVKKFENKVEWGIDLASEHERYLTEEHFKAPVIVFNYPKGIK
AFYMKVNEDKKTVAAMDLLVPKVGELIGGSQREEDYEVLRTRILEMGLPLEPYEWYLDLR
RYGSVKHSGFGLGFERMILFATGIENIRDVIPFPRYPGRADL

Transcript Sequence

Gene sequence data has not been registered.